Due to the daily attempted posting of spam in the comments, I have shut commenting down for now.
Carried out an update today. The server was down for approximately 30 minutes.
SD card backed up using Win32DiskImager
Update & upgrade performed
Now for another backup!
I rebuilt the web server from scratch. It was the E-Publishing theme changes that stopped the Filebase Plug-in from working. It works now. Maybe I can cure some of the other page base issues now that I have that working.
I have reinstalled all of the plugins that I had before and still no issues so far!